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  5. LOC_Os03g37640.1

LOC_Os03g37640.1 (LOC_Os03g37640)


Aliases : LOC_Os03g37640

Description : metabolite transporter (DTX)


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g37640.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT3G21690 No alias MATE efflux family protein 0.03 OrthoFinder output from all 47 species
Aev_g13724 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30780 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05275 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16023 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17838 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23130 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24726.t1 Aspi01Gene24726 metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28635.t1 Aspi01Gene28635 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36385.t1 Aspi01Gene36385 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38263.t1 Aspi01Gene38263 metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.49 No alias Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
Ehy_g10396 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19698 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012741001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
Gb_31018 No alias metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Gb_40011 No alias metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
LOC_Os03g37411.1 LOC_Os03g37411 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
LOC_Os10g20390.1 LOC_Os10g20390 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Len_g15418 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16713 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
MA_226827g0010 No alias metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
MA_4390g0010 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Msp_g48765 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12134 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37454 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37963 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02117 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03478 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29734 No alias metabolite transporter *(DTX) & original description: none 0.01 OrthoFinder output from all 47 species
Solyc02g032660.3.1 Solyc02g032660 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Solyc10g007100.3.1 ALF5, Solyc10g007100 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Solyc12g005850.2.1 Solyc12g005850 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e005085_P001 Zm00001e005085 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e012501_P002 Zm00001e012501 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e022499_P002 Zm00001e022499 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e024700_P001 Zm00001e024700 metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 50 210
IPR002528 MATE_fam 272 433
No external refs found!