LOC_Os03g39830.1 (LOC_Os03g39830)


Aliases : LOC_Os03g39830

Description : no hits & (original description: none)


Gene families : OG0008158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008158_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g39830.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT2G05310 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT4G13500 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 OrthoFinder output from all 47 species
Adi_g051054 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g26179 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g22876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23458 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g28556 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09343 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene59286.t1 Aspi01Gene59286 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001516 No alias not classified & original description: CDS=155-547 0.04 OrthoFinder output from all 47 species
Cre03.g151200 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g06595 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g48927 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g00342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_24351 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g22260.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pnu_g13559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016978 No alias not classified & original description: CDS=666-1046 0.02 OrthoFinder output from all 47 species
Sam_g29443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34752 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e004952_P001 Zm00001e004952 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!