LOC_Os03g41940.1 (LOC_Os03g41940)


Aliases : LOC_Os03g41940

Description : no hits & (original description: none)


Gene families : OG0011431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011431_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g41940.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g41640.1 LOC_Os03g41640 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os04g25580.1 LOC_Os04g25580 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g18960.1 LOC_Os05g18960 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os06g13620.1 LOC_Os06g13620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!