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  5. LOC_Os03g44200.1

LOC_Os03g44200.1 (AtBECLIN1, ATATG6,...)


Aliases : AtBECLIN1, ATATG6, ATG6, BECLIN1, LOC_Os03g44200

Description : regulatory component VPS30/ATG6 of PI3-kinase vesicle nucleation complex I/II


Gene families : OG0004790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004790_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g44200.1

Target Alias Description ECC score Gene Family Method Actions
AT3G61710 AtBECLIN1,... AUTOPHAGY 6 0.04 OrthoFinder output from all 47 species
Aspi01Gene00705.t2 AtBECLIN1,... regulatory component *(VPS30/ATG6) of PI3-kinase vesicle... 0.03 OrthoFinder output from all 47 species
Cre01.g020264 AtBECLIN1,... Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.03 OrthoFinder output from all 47 species
Ehy_g01420 AtBECLIN1,... regulatory component *(VPS30/ATG6) of PI3-kinase vesicle... 0.02 OrthoFinder output from all 47 species
GSVIVT01027092001 AtBECLIN1,... Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.05 OrthoFinder output from all 47 species
Pir_g19803 AtBECLIN1,... regulatory component *(VPS30/ATG6) of PI3-kinase vesicle... 0.02 OrthoFinder output from all 47 species
Solyc05g050390.4.1 AtBECLIN1,... regulatory component VPS30/ATG6 of PI3-kinase vesicle... 0.06 OrthoFinder output from all 47 species
Zm00001e028425_P003 AtBECLIN1,... regulatory component VPS30/ATG6 of PI3-kinase vesicle... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR041691 Atg6/beclin_CC 174 302
IPR040455 Atg6_BARA 305 480
No external refs found!