LOC_Os03g44290.1 (ATHEXP BETA 1.1,...)


Aliases : ATHEXP BETA 1.1, EXPB4, ATEXPB4, LOC_Os03g44290

Description : Expansin-B12 OS=Oryza sativa subsp. japonica (sp|q10g40|exb12_orysj : 537.0)


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g44290.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00063420 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
AT2G03090 EXP15, ATEXPA15,... expansin A15 0.03 OrthoFinder output from all 47 species
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.03 OrthoFinder output from all 47 species
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G15370 ATHEXP ALPHA... expansin 12 0.04 OrthoFinder output from all 47 species
AT4G28250 EXPB3, ATEXPB3,... expansin B3 0.03 OrthoFinder output from all 47 species
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 OrthoFinder output from all 47 species
Adi_g007241 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015058 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17605 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21493 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g22695 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16199 ATEXPA10,... alpha-class expansin & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g16382 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26309 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01552 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Als_g02221 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03581 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11470 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12167 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14978 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15151 EXPB3, ATEXPB3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15347 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51474 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52203 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00307 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07936 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13340 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30155 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00363.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00503.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14225.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14342.t1 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41811.t1 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41813.t1 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52606.t1 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59831.t1 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008552 LPA66 alpha-class expansin & original description: CDS=75-848 0.02 OrthoFinder output from all 47 species
Azfi_s0117.g046537 EXP15, ATEXPA15,... alpha-class expansin & original description: CDS=74-868 0.04 OrthoFinder output from all 47 species
Azfi_s0891.g091270 ATEXPA10,... alpha-class expansin & original description: CDS=75-896 0.03 OrthoFinder output from all 47 species
Cba_g10144 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10427 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G026000.1 ATEXPA10,... alpha-class expansin & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.17G039900.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G046400.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g02211 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08123 ATEXPA1, EXP1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16853 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22602 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43609 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02593 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18163 EXP9, EXPA9,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16559 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01899 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08178 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16057 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16061 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011437001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01014362001 ATHEXP ALPHA... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01016525001 ATEXPA4, ATEXP4,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Gb_20678 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os01g14660.1 ATHEXP ALPHA... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os02g16839.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os04g46650.1 ATHEXP BETA 1.4,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os06g01920.1 ATEXP7, EXPA7,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os10g39110.1 ATEXP7, EXPA7,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Len_g03621 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13532 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19633 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37319 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Len_g40078 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43179 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57716 EXP15, ATEXPA15,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25335 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37654 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37801 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
MA_45587g0020 ATEXP7, EXPA7,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g26350.1 ATEXP14, EXPA14,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g10849 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15871 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23319 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31390 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04247 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05268 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11205 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07847 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20451 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25427 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27815 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27816 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33848 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34219 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40748 ATEXPA10,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43051 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59568 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05687 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06874 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08562 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003482 EXPA8, ATHEXP... alpha-class expansin & original description: CDS=15-929 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011304 EXPA8, ATHEXP... alpha-class expansin & original description: CDS=181-945 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019980 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=1-819 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0121.g021430 ATEXPA10,... alpha-class expansin & original description: CDS=411-1286 0.03 OrthoFinder output from all 47 species
Sam_g06188 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g088100.3.1 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc06g076220.3.1 EXPA6, ATEXP6,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc07g049540.2.1 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Spa_g03664 EXP15, ATEXPA15,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10234 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11698 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08942 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14285 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25553 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29823 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30407 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003888_P001 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e003889_P001 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e005019_P001 ATHEXP BETA 1.4,... Expansin-B12 OS=Oryza sativa subsp. japonica... 0.11 OrthoFinder output from all 47 species
Zm00001e006194_P001 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e008845_P003 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e015230_P001 EXPB3, ATEXPB3,... beta-class expansin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 241 324
IPR009009 RlpA-like_DPBB 138 228
No external refs found!