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  5. LOC_Os03g46470.1

LOC_Os03g46470.1 (ZIP10, LOC_Os03g46470)


Aliases : ZIP10, LOC_Os03g46470

Description : metal cation transporter (ZIP)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g46470.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00182180 ATIRT1, IRT1,... Solute transport.carrier-mediated transport.ZIP... 0.04 OrthoFinder output from all 47 species
AMTR_s00062p00183460 ZIP1,... Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00183790 ZIP1,... Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
AT2G32270 ZIP3 zinc transporter 3 precursor 0.04 OrthoFinder output from all 47 species
AT4G19690 ATIRT1, IRT1 iron-regulated transporter 1 0.08 OrthoFinder output from all 47 species
Adi_g009766 IRT3, ATIRT3 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23170 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06465 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27419.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene41188.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013568 ZIP1 metal cation transporter *(ZIP) & original description: CDS=1-972 0.04 OrthoFinder output from all 47 species
Azfi_s0694.g082561 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0974.g094129 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.01G113400.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.04G081000.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G032100.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G030000.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G001400.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g31389 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01101 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06502 ZIP10 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Gb_28845 ZIP1 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Gb_39061 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Gb_39062 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
MA_199003g0010 ATZIP6, ZIP6 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
MA_6126514g0010 ZIP1 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Msp_g18125 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28648 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10666 IRT3, ATIRT3 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17001 No alias metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo230231 IRT3, ATIRT3 Solute transport.carrier-mediated transport.ZIP... 0.05 OrthoFinder output from all 47 species
Smo231997 ATZIP4, ZIP4 Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
Smo91749 ZIP1 Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
Solyc02g069190.4.1 ZIP10, Solyc02g069190 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Solyc02g069200.3.1 ATIRT1, IRT1,... metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Solyc02g069210.3.1 ZIP10, Solyc02g069210 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Solyc05g053370.3.1 ATZIP6, ZIP6,... metal cation transporter (ZIP) 0.08 OrthoFinder output from all 47 species
Solyc07g043230.3.1 ZIP3, Solyc07g043230 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Spa_g03784 IRT3, ATIRT3 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005195_P002 ZIP10, Zm00001e005195 metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Zm00001e033157_P001 ZIP5, Zm00001e033157 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 60 371
No external refs found!