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  5. LOC_Os03g47820.1

LOC_Os03g47820.1 (AGO5, LOC_Os03g47820)


Aliases : AGO5, LOC_Os03g47820

Description : Protein argonaute 12 OS=Oryza sativa subsp. japonica (sp|q7y001|ago12_orysj : 1757.0)


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os03g47820.1

Target Alias Description ECC score Gene Family Method Actions
Als_g06375 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11029 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Dcu_g03128 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13472 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Spa_g09278 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51306 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57163 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003100 PAZ_dom 408 531
IPR032473 Argonaute_Mid_dom 607 685
IPR003165 Piwi 704 1020
IPR014811 ArgoL1 351 401
IPR032474 Argonaute_N 204 335
IPR032472 ArgoL2 542 596
No external refs found!