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  5. LOC_Os03g47949.1

LOC_Os03g47949.1 (UPL7, LOC_Os03g47949)


Aliases : UPL7, LOC_Os03g47949

Description : monomeric E3 ubiquitin ligase (HECT)


Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g47949.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00213880 UPL6,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT3G17205 UPL6 ubiquitin protein ligase 6 0.03 OrthoFinder output from all 47 species
AT3G53090 UPL7 ubiquitin-protein ligase 7 0.07 OrthoFinder output from all 47 species
Aev_g04174 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20441 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01843 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10603 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18041.t1 UPL6, Aspi01Gene18041 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G020700.1 UPL6, Ceric.05G020700 E3 ubiquitin ligase *(UPL6) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z062300.1 UPL7, Ceric.1Z062300 E3 ubiquitin ligase *(UPL6) & original description:... 0.04 OrthoFinder output from all 47 species
Cre03.g159200 UPL7 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dac_g21661 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10609 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39553 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033734001 UPL7 Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Lfl_g08600 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10260113g0010 UPL7 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Mp3g18370.1 UPL6 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Nbi_g13855 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005368 UPL7 E3 ubiquitin ligase *(UPL6) & original description: CDS=254-3667 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014924 UPL6 E3 ubiquitin ligase *(UPL6) & original description: CDS=293-3301 0.02 OrthoFinder output from all 47 species
Smo443962 UPL6 Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Solyc01g057900.3.1 UPL6, Solyc01g057900 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Zm00001e031128_P003 UPL6, Zm00001e031128 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Zm00001e039899_P001 UPL6, Zm00001e039899 monomeric E3 ubiquitin ligase (HECT) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 223 536
No external refs found!