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  5. LOC_Os03g49150.1

LOC_Os03g49150.1 (LOC_Os03g49150)


Aliases : LOC_Os03g49150

Description : Protein yippee-like OS=Solanum tuberosum (sp|p59234|yipl_soltu : 205.0)


Gene families : OG0000369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g49150.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Ala_g16316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g74742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g23472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g062890.4.1 Solyc07g062890 Protein yippee-like At5g53940 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g02939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 13 105
No external refs found!