Aliases : LOC_Os03g49930
Description : Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana (sp|q9fxh1|ppr52_arath : 83.2)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00228270 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067873 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27909 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g29475 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g40645 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34729.t1 | Aspi01Gene34729 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11909 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g24367 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g44516 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G009800.1 | Ceric.11G009800 | not classified & original description: pacid=50594985... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G076500.1 | Ceric.17G076500 | not classified & original description: pacid=50617139... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G049100.1 | Ceric.18G049100 | not classified & original description: pacid=50621467... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G077100.1 | Ceric.18G077100 | not classified & original description: pacid=50621411... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04238 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g29241 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01005577001 | EMB2261 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g07790 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g40128 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07034 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07580 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g43551 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25357 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g32476 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g55721 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g64875 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g12786 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004758 | No alias | not classified & original description: CDS=1-2223 | 0.02 | OrthoFinder output from all 47 species | |
| Smo116559 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g45880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013166_P001 | Zm00001e013166 | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013232_P001 | Zm00001e013232 | Pentatricopeptide repeat-containing protein At2g36730... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 183 | 233 |
| No external refs found! |
