Aliases : ATO, LOC_Os03g50850
Description : component SF3A3 of splicing factor 3A complex
Gene families : OG0005469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g024559 | ATO | component *(SF3A3) of splicing factor 3A complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03132 | ATO | component *(SF3A3) of splicing factor 3A complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g01809 | ATO | component *(SF3A3) of splicing factor 3A complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G050500.1 | ATO, Ceric.22G050500 | component *(SF3A3) of splicing factor 3A complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000912.17 | ATO | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g297750 | ATO | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01038711001 | ATO | RNA processing.RNA splicing.U2-type-intron-specific... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g03055 | ATO | component *(SF3A3) of splicing factor 3A complex &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10435481g0010 | ATO | component SF3A3 of splicing factor 3A complex | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11580 | ATO | component *(SF3A3) of splicing factor 3A complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c5_21100V3.1 | ATO, Pp3c5_21100 | splicing factor-related | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g14896 | ATO | component *(SF3A3) of splicing factor 3A complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo169846 | ATO | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g083430.3.1 | ATO, Solyc03g083430 | component SF3A3 of splicing factor 3A complex | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06550 | ATO | component *(SF3A3) of splicing factor 3A complex &... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006378 | mRNA polyadenylation | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |
