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  5. LOC_Os03g51250.1

LOC_Os03g51250.1 (CAP1, ATCAP1, CAP 1,...)


Aliases : CAP1, ATCAP1, CAP 1, LOC_Os03g51250

Description : CAP1 actin organisation regulator protein


Gene families : OG0005404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g51250.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene70862.t1 CAP1, ATCAP1,... regulatory protein *(CAP1) of actin organisation &... 0.03 OrthoFinder output from all 47 species
Dcu_g02855 CAP1, ATCAP1, CAP 1 regulatory protein *(CAP1) of actin organisation &... 0.07 OrthoFinder output from all 47 species
Dde_g21661 CAP1, ATCAP1, CAP 1 regulatory protein *(CAP1) of actin organisation &... 0.04 OrthoFinder output from all 47 species
Mp7g03950.1 CAP1, ATCAP1, CAP 1 CAP1 actin organisation regulator protein 0.03 OrthoFinder output from all 47 species
Msp_g01598 CAP1, ATCAP1, CAP 1 regulatory protein *(CAP1) of actin organisation &... 0.04 OrthoFinder output from all 47 species
Nbi_g02190 CAP1, ATCAP1, CAP 1 regulatory protein *(CAP1) of actin organisation &... 0.03 OrthoFinder output from all 47 species
Ore_g09223 CAP1, ATCAP1, CAP 1 regulatory protein *(CAP1) of actin organisation &... 0.04 OrthoFinder output from all 47 species
Pir_g10864 CAP1, ATCAP1, CAP 1 regulatory protein *(CAP1) of actin organisation &... 0.02 OrthoFinder output from all 47 species
Pir_g31034 CAP1, ATCAP1, CAP 1 regulatory protein *(CAP1) of actin organisation &... 0.02 OrthoFinder output from all 47 species
Pnu_g19307 CAP1, ATCAP1, CAP 1 regulatory protein *(CAP1) of actin organisation &... 0.02 OrthoFinder output from all 47 species
Zm00001e012141_P001 CAP1, ATCAP1,... CAP1 actin organisation regulator protein 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013912 Adenylate_cyclase-assoc_CAP_C 332 489
IPR013992 Adenylate_cyclase-assoc_CAP_N 4 307
No external refs found!