1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g51960.1

LOC_Os03g51960.1 (LOC_Os03g51960)


Aliases : LOC_Os03g51960

Description : no description available(sp|q9zuu2|pxl2c_arath : 85.9)


Gene families : OG0004539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004539_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g51960.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g025683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30545.t1 Aspi01Gene30545 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011353 No alias not classified & original description: CDS=177-953 0.03 OrthoFinder output from all 47 species
Cba_g23312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G051600.1 Ceric.13G051600 not classified & original description: pacid=50635538... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000254.94 No alias No description available 0.05 OrthoFinder output from all 47 species
Dcu_g18208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007444001 No alias Thioredoxin-like protein AAED1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g32048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_106094g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_159242g0010 No alias no description available(sp|q9zuu2|pxl2c_arath : 85.9) 0.02 OrthoFinder output from all 47 species
MA_6785947g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g00430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012107_P001 Zm00001e012107 no description available(sp|q9zuu2|pxl2c_arath : 88.6) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR032801 PXL2A/B/C 125 240
No external refs found!