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  5. LOC_Os03g53900.1

LOC_Os03g53900.1 (LOC_Os03g53900)


Aliases : LOC_Os03g53900

Description : no hits & (original description: none)


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53900.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G68300 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G58450 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g048389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28485.t1 Aspi01Gene28485 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37517.t1 Aspi01Gene37517 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48339.t1 Aspi01Gene48339 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010938 No alias not classified & original description: CDS=155-715 0.05 OrthoFinder output from all 47 species
Azfi_s0303.g063793 No alias not classified & original description: CDS=117-590 0.05 OrthoFinder output from all 47 species
Cba_g09704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G013300.1 Ceric.04G013300 not classified & original description: pacid=50631698... 0.03 OrthoFinder output from all 47 species
Ceric.07G000800.1 Ceric.07G000800 not classified & original description: pacid=50627155... 0.03 OrthoFinder output from all 47 species
Ceric.28G005600.1 Ceric.28G005600 not classified & original description: pacid=50569579... 0.03 OrthoFinder output from all 47 species
Dac_g08483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g26303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20927 RD2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g23531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027993001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031226001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031228001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_32063 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g16126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g25137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10437265g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10437265g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_188861g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g05760.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g21502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g25803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016731 No alias not classified & original description: CDS=1-588 0.03 OrthoFinder output from all 47 species
Sam_g06182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo123808 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g100370.3.1 Solyc01g100370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g084540.3.1 Solyc06g084540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g12961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005689_P006 Zm00001e005689 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 25 179
No external refs found!