1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g54000.1

LOC_Os03g54000.1 (OPT3, ATOPT3, LOC_Os03g54000)


Aliases : OPT3, ATOPT3, LOC_Os03g54000

Description : oligopeptide transporter (OPT)


Gene families : OG0000539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g54000.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00190940 OPT1, ATOPT1,... Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
AT4G16370 OPT3, ATOPT3 oligopeptide transporter 0.12 OrthoFinder output from all 47 species
Aev_g18558 OPT3, ATOPT3 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16370 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z045000.1 OPT3, ATOPT3,... oligopeptide transporter *(OPT) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.35G066400.1 OPT4, ATOPT4,... oligopeptide transporter *(OPT) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g21019 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019633001 OPT7, ATOPT7 Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
Gb_01018 OPT4, ATOPT4 oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
MA_10185385g0010 OPT4, ATOPT4 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
MA_132413g0010 OPT3, ATOPT3 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Mp4g06980.1 OPT7, ATOPT7 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Ore_g20966 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16769 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Smo229868 OPT4, ATOPT4 Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
Smo88962 OPT7, ATOPT7 Solute transport.carrier-mediated transport.OPT... 0.05 OrthoFinder output from all 47 species
Solyc03g033460.3.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
Solyc11g012700.2.1 OPT3, ATOPT3,... oligopeptide transporter (OPT) 0.04 OrthoFinder output from all 47 species
Zm00001e005697_P002 OPT3, ATOPT3,... oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 49 720
No external refs found!