1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g55320.1

LOC_Os03g55320.1 (LOC_Os03g55320)


Aliases : LOC_Os03g55320

Description : clade D phosphatase


Gene families : OG0000288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000288_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g55320.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT4G33920 No alias Protein phosphatase 2C family protein 0.06 OrthoFinder output from all 47 species
AT5G02760 No alias Protein phosphatase 2C family protein 0.02 OrthoFinder output from all 47 species
AT5G06750 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
Adi_g020768 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g039657 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040458 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040873 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059572 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060830 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068644 No alias clade D phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g102836 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110214 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15160 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21407 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38698 No alias clade D phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00330.t1 Aspi01Gene00330 clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26360.t1 Aspi01Gene26360 clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26360.t2 Aspi01Gene26360 clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26361.t1 Aspi01Gene26361 clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26361.t2 Aspi01Gene26361 clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39240.t1 Aspi01Gene39240 clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51360.t1 Aspi01Gene51360 clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036574 No alias clade D phosphatase & original description: CDS=579-1844 0.03 OrthoFinder output from all 47 species
Cba_g13539 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13542 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22251 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24731 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36266 No alias clade D phosphatase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.02G058900.1 Ceric.02G058900 clade D phosphatase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.03G046400.1 Ceric.03G046400 clade D phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G064400.1 Ceric.06G064400 clade D phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.10G023400.1 Ceric.10G023400 clade D phosphatase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.22G007100.1 Ceric.22G007100 clade D phosphatase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g13370 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04511 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g21220 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02131 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03826 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17242 No alias clade D phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g21451 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009374001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
GSVIVT01037875001 No alias Protein modification.dephosphorylation.serine/threonine... 0.06 OrthoFinder output from all 47 species
Gb_16018 No alias clade D phosphatase 0.02 OrthoFinder output from all 47 species
Gb_37566 No alias clade D phosphatase 0.03 OrthoFinder output from all 47 species
LOC_Os03g04430.1 LOC_Os03g04430 clade D phosphatase 0.03 OrthoFinder output from all 47 species
LOC_Os07g02330.1 LOC_Os07g02330 clade D phosphatase 0.03 OrthoFinder output from all 47 species
LOC_Os12g39120.1 LOC_Os12g39120 clade D phosphatase 0.04 OrthoFinder output from all 47 species
Len_g01728 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
MA_100871g0010 No alias Probable protein phosphatase 2C 60 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_10431182g0010 No alias Probable protein phosphatase 2C 78 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Msp_g01126 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06129 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11911 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15975 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02003 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06370 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22156 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02837 No alias clade D phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03140 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03826 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16622 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019273 No alias clade D phosphatase & original description: CDS=1226-2389 0.03 OrthoFinder output from all 47 species
Sam_g09231 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11283 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Smo183083 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
Solyc02g092750.3.1 Solyc02g092750 clade D phosphatase 0.04 OrthoFinder output from all 47 species
Solyc06g065920.4.1 Solyc06g065920 clade D phosphatase 0.02 OrthoFinder output from all 47 species
Solyc10g049630.2.1 Solyc10g049630 clade D phosphatase 0.05 OrthoFinder output from all 47 species
Spa_g07555 No alias clade D phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07880 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29569 No alias clade D phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39444 No alias clade D phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31869 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000308_P001 Zm00001e000308 clade D phosphatase 0.04 OrthoFinder output from all 47 species
Zm00001e005757_P001 Zm00001e005757 clade D phosphatase 0.03 OrthoFinder output from all 47 species
Zm00001e011992_P001 Zm00001e011992 clade D phosphatase 0.05 OrthoFinder output from all 47 species
Zm00001e013293_P001 Zm00001e013293 clade D phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e038117_P001 Zm00001e038117 clade D phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e038946_P001 Zm00001e038946 clade D phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 54 304
No external refs found!