LOC_Os03g55880.1 (LOC_Os03g55880)


Aliases : LOC_Os03g55880

Description : no hits & (original description: none)


Gene families : OG0000091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g55880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00054880 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00022p00043220 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00171390 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00105p00148840 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G18290 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT1G76600 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT3G03280 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g012199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23035 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g23563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05356 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g08632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50190 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g57803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g00750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01054.t1 Aspi01Gene01054 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34873.t1 Aspi01Gene34873 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36873.t1 Aspi01Gene36873 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36885.t1 Aspi01Gene36885 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36907.t1 Aspi01Gene36907 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65685.t1 Aspi01Gene65685 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68688.t1 Aspi01Gene68688 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68697.t1 Aspi01Gene68697 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68698.t1 Aspi01Gene68698 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68702.t1 Aspi01Gene68702 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68716.t1 Aspi01Gene68716 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G027400.1 Ceric.14G027400 not classified & original description: pacid=50633616... 0.04 OrthoFinder output from all 47 species
Ceric.14G096800.1 Ceric.14G096800 not classified & original description: pacid=50633991... 0.03 OrthoFinder output from all 47 species
Ceric.14G097100.1 Ceric.14G097100 not classified & original description: pacid=50633776... 0.03 OrthoFinder output from all 47 species
Ceric.16G033100.1 Ceric.16G033100 not classified & original description: pacid=50589567... 0.02 OrthoFinder output from all 47 species
Ceric.1Z035600.1 Ceric.1Z035600 not classified & original description: pacid=50602495... 0.03 OrthoFinder output from all 47 species
Ceric.24G013000.1 Ceric.24G013000 not classified & original description: pacid=50629345... 0.03 OrthoFinder output from all 47 species
Ceric.26G065100.1 Ceric.26G065100 not classified & original description: pacid=50599287... 0.02 OrthoFinder output from all 47 species
Ceric.29G014700.1 Ceric.29G014700 not classified & original description: pacid=50624719... 0.02 OrthoFinder output from all 47 species
Dac_g02028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g40249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_01099 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05757 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_35301 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g19880.1 LOC_Os01g19880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g48680.1 LOC_Os06g48680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g03117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10238024g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_119175g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_120551g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_27857g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_897390g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g19320.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g18700.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g26421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g21541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60781 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000026 No alias not classified & original description: CDS=1-1638 0.02 OrthoFinder output from all 47 species
Sam_g12718 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g006160.1.1 Solyc03g006160 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g034410.1.1 Solyc03g034410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g06542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001420_P001 Zm00001e001420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e005612_P001 Zm00001e005612 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011957_P001 Zm00001e011957 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e016818_P001 Zm00001e016818 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020136_P001 Zm00001e020136 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e026461_P001 Zm00001e026461 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030501_P001 Zm00001e030501 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e042459_P001 Zm00001e042459 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 9 138
No external refs found!