LOC_Os03g56400.1 (LOC_Os03g56400)


Aliases : LOC_Os03g56400

Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 894.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g56400.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00220510 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00098p00155650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g39350... 0.03 OrthoFinder output from all 47 species
AT3G25970 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g002735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003279 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004333 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g004435 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005661 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036772 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g037215 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057625 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099164 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32785 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38141 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05139 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06902 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07793 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08105 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06042 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g22716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22058 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68455 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000466 No alias not classified & original description: CDS=1-1575 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012359 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0021.g015640 No alias not classified & original description: CDS=1-1965 0.04 OrthoFinder output from all 47 species
Azfi_s0034.g025337 DOT4 not classified & original description: CDS=145-3054 0.04 OrthoFinder output from all 47 species
Azfi_s0283.g063049 OTP86 ssDNA-binding protein *(OSB) & original description: CDS=1-2283 0.05 OrthoFinder output from all 47 species
Cba_g03281 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19296 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34429 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G003100.1 Ceric.17G003100 not classified & original description: pacid=50617164... 0.03 OrthoFinder output from all 47 species
Ceric.20G051200.1 Ceric.20G051200 not classified & original description: pacid=50566546... 0.03 OrthoFinder output from all 47 species
Ceric.27G070400.1 CRR22, Ceric.27G070400 not classified & original description: pacid=50605716... 0.03 OrthoFinder output from all 47 species
Dac_g31222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07044 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07457 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08294 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40967 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42364 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45849 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g37952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003804001 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
GSVIVT01009574001 OSB1 Cell cycle.organelle machineries.DNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01010898001 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.06 OrthoFinder output from all 47 species
GSVIVT01012159001 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.07 OrthoFinder output from all 47 species
GSVIVT01014727001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
GSVIVT01031733001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.06 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.03 OrthoFinder output from all 47 species
Gb_06115 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_16062 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_21434 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_22477 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Gb_29872 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_40437 CRR22 RNA editing factor (MEF3) 0.03 OrthoFinder output from all 47 species
Len_g03252 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g03781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09267 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18289 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g20619 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g24214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g30110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g49094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54483 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54669 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g12945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39947 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_121512g0010 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
MA_127785g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
MA_141731g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_183278g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_3612g0010 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
MA_408185g0010 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.02 OrthoFinder output from all 47 species
MA_445076g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_474261g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.07 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
MA_785826g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_794605g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_98224g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g04467 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09691 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26082 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34226 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03163 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10571 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17174 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38645 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37271 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03894 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10282 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32654 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006276 No alias not classified & original description: CDS=1-1806 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008817 CRR22 not classified & original description: CDS=1-2019 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022787 No alias not classified & original description: CDS=1-1491 0.04 OrthoFinder output from all 47 species
Sam_g05074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12540 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo10066 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo107359 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo108652 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo134581 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Smo399 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Smo90123 OTP84 Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
Smo90563 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Solyc01g098480.3.1 Solyc01g098480 Pentatricopeptide repeat-containing protein At2g21090... 0.08 OrthoFinder output from all 47 species
Solyc02g065030.1.1 EMB2758, Solyc02g065030 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Solyc03g025700.2.1 Solyc03g025700 OTP70 plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Solyc03g116000.1.1 Solyc03g116000 Pentatricopeptide repeat-containing protein At3g47530... 0.03 OrthoFinder output from all 47 species
Solyc04g063300.3.1 Solyc04g063300 Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species
Solyc04g074160.3.1 Solyc04g074160 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc06g009500.1.1 Solyc06g009500 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc06g053850.4.1 Solyc06g053850 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Solyc07g042760.1.1 Solyc07g042760 Pentatricopeptide repeat-containing protein At4g31070,... 0.03 OrthoFinder output from all 47 species
Solyc09g007040.1.1 Solyc09g007040 Pentatricopeptide repeat-containing protein At3g53360,... 0.04 OrthoFinder output from all 47 species
Spa_g01903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14609 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26791 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30264 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41043 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04699 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28890 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35082 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.05 OrthoFinder output from all 47 species
Zm00001e001918_P001 EMB2758, Zm00001e001918 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Zm00001e003562_P001 REME1, Zm00001e003562 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
Zm00001e011519_P001 Zm00001e011519 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
Zm00001e013713_P001 Zm00001e013713 Pentatricopeptide repeat-containing protein At4g20770... 0.04 OrthoFinder output from all 47 species
Zm00001e018346_P001 Zm00001e018346 Pentatricopeptide repeat-containing protein At3g29230... 0.05 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
Zm00001e021026_P001 Zm00001e021026 Pentatricopeptide repeat-containing protein At1g09190... 0.03 OrthoFinder output from all 47 species
Zm00001e023333_P001 Zm00001e023333 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e023504_P001 CRR22, Zm00001e023504 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e027978_P001 MEF1, Zm00001e027978 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Zm00001e028330_P001 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.05 OrthoFinder output from all 47 species
Zm00001e032242_P001 Zm00001e032242 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Zm00001e032485_P001 EMB2744, Zm00001e032485 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Zm00001e033171_P001 Zm00001e033171 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Zm00001e036301_P001 Zm00001e036301 Pentatricopeptide repeat-containing protein At4g30700... 0.05 OrthoFinder output from all 47 species
Zm00001e038850_P001 EMB2758, Zm00001e038850 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e040418_P001 Zm00001e040418 Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
Zm00001e040920_P001 Zm00001e040920 Pentatricopeptide repeat-containing protein At3g26540... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 260 309
IPR002885 Pentatricopeptide_repeat 497 544
IPR002885 Pentatricopeptide_repeat 395 442
IPR032867 DYW_dom 671 794
IPR002885 Pentatricopeptide_repeat 97 124
IPR002885 Pentatricopeptide_repeat 203 228
IPR002885 Pentatricopeptide_repeat 336 357
IPR002885 Pentatricopeptide_repeat 571 596
IPR002885 Pentatricopeptide_repeat 366 394
IPR002885 Pentatricopeptide_repeat 130 160
No external refs found!