LOC_Os03g57240.1 (LOC_Os03g57240)


Aliases : LOC_Os03g57240

Description : C2H2 zinc finger transcription factor


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57240.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 OrthoFinder output from all 47 species
AMTR_s00124p00105750 KNU,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 OrthoFinder output from all 47 species
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.02 OrthoFinder output from all 47 species
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.02 OrthoFinder output from all 47 species
Aev_g00990 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.1 OrthoFinder output from all 47 species
Aev_g04158 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g16389 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g20923 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03060.t1 ZFP10, ATZFP10,... C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51181.t1 KNU, Aspi01Gene51181 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene60683.t1 Aspi01Gene60683 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene60689.t1 Aspi01Gene60689 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene61235.t1 Aspi01Gene61235 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011541 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.05G076800.1 ZFP10, ATZFP10,... not classified & original description: pacid=50577410... 0.03 OrthoFinder output from all 47 species
Ceric.05G076900.1 ZFP10, ATZFP10,... not classified & original description: pacid=50579147... 0.03 OrthoFinder output from all 47 species
Ceric.1Z195100.1 ZFP10, ATZFP10,... not classified & original description: pacid=50637475... 0.02 OrthoFinder output from all 47 species
Dcu_g23173 No alias C2H2 subclass ZFP transcription factor & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01016493001 RAB, RBE RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_57615g0010 ZFP1, ATZFP1 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Nbi_g10608 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g19764 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g45144 ZFP7 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g07988 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c6_19230V3.1 Pp3c6_19230 C2H2 and C2HC zinc fingers superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000637 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc04g014540.3.1 ZFP4, Solyc04g014540 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc05g006310.3.1 ZFP5, Solyc05g006310 C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Solyc05g009180.1.1 Solyc05g009180 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc10g080600.3.1 GIS, Solyc10g080600 C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e000996_P001 ZFP4, Zm00001e000996 C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Zm00001e005916_P001 Zm00001e005916 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e011910_P001 Zm00001e011910 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e016256_P001 Zm00001e016256 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e017991_P001 ZFP7, Zm00001e017991 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e022212_P001 ZFP8, Zm00001e022212 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e034883_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e038617_P001 ZFP4, Zm00001e038617 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e040612_P001 ZFP11, ATZFP11,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA

No InterPro domains available for this sequence

No external refs found!