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  5. LOC_Os03g57340.1

LOC_Os03g57340.1 (J2, ATJ2, LOC_Os03g57340)


Aliases : J2, ATJ2, LOC_Os03g57340

Description : co-chaperone (Hsp40)


Gene families : OG0000480 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57340.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT3G44110 ATJ3, ATJ DNAJ homologue 3 0.1 OrthoFinder output from all 47 species
AT5G22060 J2, ATJ2 DNAJ homologue 2 0.04 OrthoFinder output from all 47 species
Adi_g015633 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049048 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055595 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02155 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16801 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31754 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g24025 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g53710 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09449 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g11180 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58800.t1 ATJ3, ATJ,... co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010708 J2, ATJ2 co-chaperone *(Hsp40) & original description: CDS=475-1611 0.1 OrthoFinder output from all 47 species
Cba_g04864 J2, ATJ2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05119 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09480 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16826 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.11 J2, ATJ2 DnaJ protein homolog 2 OS=Allium porrum 0.02 OrthoFinder output from all 47 species
Cre17.g701500 J2, ATJ2 DnaJ protein homolog ANJ1 OS=Atriplex nummularia 0.12 OrthoFinder output from all 47 species
Dac_g02711 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22907 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g12218 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01034612001 J2, ATJ2 DnaJ protein homolog OS=Cucumis sativus 0.03 OrthoFinder output from all 47 species
GSVIVT01036049001 ATJ3, ATJ DnaJ protein homolog OS=Cucumis sativus 0.11 OrthoFinder output from all 47 species
LOC_Os02g43930.1 ATJ3, ATJ, LOC_Os02g43930 co-chaperone (Hsp40) 0.04 OrthoFinder output from all 47 species
Len_g22731 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427579g0030 ATJ3, ATJ DnaJ protein homolog OS=Cucumis sativus... 0.03 OrthoFinder output from all 47 species
Mp5g00390.1 ATJ3, ATJ co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
Msp_g10590 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15888 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33328 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03542 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g29492 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31580 ATJ3, ATJ not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06339 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11857 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007315 ATJ3, ATJ not classified & original description: CDS=280-1335 0.03 OrthoFinder output from all 47 species
Sam_g35241 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Smo267228 J2, ATJ2 DnaJ protein homolog 2 OS=Allium porrum 0.11 OrthoFinder output from all 47 species
Solyc01g090550.3.1 J2, ATJ2, Solyc01g090550 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Solyc04g009770.3.1 ATJ3, ATJ, Solyc04g009770 co-chaperone (Hsp40) 0.04 OrthoFinder output from all 47 species
Solyc11g071830.2.1 ATJ3, ATJ, Solyc11g071830 co-chaperone (Hsp40) 0.17 OrthoFinder output from all 47 species
Spa_g07198 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17349 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g43389 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06486 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e001649_P001 ATJ3, ATJ, Zm00001e001649 DnaJ protein homolog 2 OS=Allium porrum... 0.03 OrthoFinder output from all 47 species
Zm00001e011902_P001 ATJ3, ATJ, Zm00001e011902 co-chaperone (Hsp40) 0.08 OrthoFinder output from all 47 species
Zm00001e014987_P001 ATJ3, ATJ, Zm00001e014987 DnaJ protein homolog 2 OS=Allium porrum... 0.03 OrthoFinder output from all 47 species
Zm00001e030785_P001 ATJ3, ATJ, Zm00001e030785 DnaJ protein homolog 2 OS=Allium porrum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001305 HSP_DnaJ_Cys-rich_dom 146 212
IPR001623 DnaJ_domain 14 71
IPR002939 DnaJ_C 120 341
No external refs found!