LOC_Os03g57490.1 (FLA17, LOC_Os03g57490)


Aliases : FLA17, LOC_Os03g57490

Description : fasciclin-type arabinogalactan protein


Gene families : OG0003330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003330_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57490.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00159330 FLA17,... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Aop_g03198 FLA17 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11206.t1 FLA17, Aspi01Gene11206 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0197.g057357 FLA16 Fasciclin-type arabinogalactan protein & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0261.g060750 FLA17 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Cba_g09444 FLA17 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Ehy_g03635 FLA17 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Ehy_g13625 FLA17 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 76 205
IPR000782 FAS1_domain 299 424
No external refs found!