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  5. LOC_Os03g60580.1

LOC_Os03g60580.1 (ADF3, LOC_Os03g60580)


Aliases : ADF3, LOC_Os03g60580

Description : actin-depolymerizing factor


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g60580.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00214610 ADF5, ATADF5,... Cytoskeleton.microfilament network.actin... 0.05 OrthoFinder output from all 47 species
AT1G01750 ADF11 actin depolymerizing factor 11 0.06 OrthoFinder output from all 47 species
AT2G16700 ADF5, ATADF5 actin depolymerizing factor 5 0.04 OrthoFinder output from all 47 species
AT4G00680 ADF8 actin depolymerizing factor 8 0.03 OrthoFinder output from all 47 species
AT4G34970 ADF9 actin depolymerizing factor 9 0.03 OrthoFinder output from all 47 species
Ala_g10466 ADF11 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28192 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37371 ADF11 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44468 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g53080 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59437 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28084 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65215.t1 ADF6, ATADF6,... actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66254.t1 ADF7, Aspi01Gene66254 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009152 ADF7 actin-depolymerizing factor & original description: CDS=19-414 0.02 OrthoFinder output from all 47 species
Cba_g07839 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77738 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34893 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01151 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025018001 ATADF4, ADF4 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01026879001 ADF11 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028963001 ADF7 Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from all 47 species
Gb_02796 ADF6, ATADF6 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
LOC_Os12g43340.1 ADF6, ATADF6,... actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
Len_g05634 ADF11 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16303 ADF11 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28669 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36617 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g17660.1 ADF8 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
Nbi_g36238 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38081 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g094400.3.1 ADF10, Solyc01g094400 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Solyc09g010440.3.1 ATADF1, ADF1,... actin-depolymerizing factor 0.04 OrthoFinder output from all 47 species
Spa_g14128 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35946 No alias acTin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006185_P001 ADF3, Zm00001e006185 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 14 147
No external refs found!