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  5. LOC_Os03g62270.1

LOC_Os03g62270.1 (LOC_Os03g62270)


Aliases : LOC_Os03g62270

Description : metabolite transporter (DTX)


Gene families : OG0000713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g62270.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00181900 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
AT1G71870 No alias MATE efflux family protein 0.02 OrthoFinder output from all 47 species
Als_g11386 ZF14 metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18067 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22673 ZF14 metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09876 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0017.g014533 No alias metabolite transporter *(DTX) & original description: CDS=1-1350 0.03 OrthoFinder output from all 47 species
Ceric.07G087900.1 ZF14, Ceric.07G087900 metabolite transporter *(DTX) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G005400.1 Ceric.11G005400 metabolite transporter *(DTX) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G043300.1 ZF14, Ceric.25G043300 metabolite transporter *(DTX) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G023400.1 ZF14, Ceric.29G023400 metabolite transporter *(DTX) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g03006 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26248 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036812001 No alias Solute transport.carrier-mediated transport.MOP... 0.05 OrthoFinder output from all 47 species
Gb_04836 ZF14 metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
Gb_25645 No alias metabolite transporter (DTX) 0.07 OrthoFinder output from all 47 species
Gb_41153 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
MA_118262g0010 No alias metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
MA_14669g0010 ZF14 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Ore_g26938 ZF14 metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42254 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01678 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17339 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21965 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014972 No alias metabolite transporter *(DTX) & original description:... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017134 ZF14 metabolite transporter *(DTX) & original description: CDS=75-1706 0.02 OrthoFinder output from all 47 species
Smo111626 No alias Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
Solyc06g060530.1.1 Solyc06g060530 metabolite transporter (DTX). bicarbonate signal... 0.03 OrthoFinder output from all 47 species
Spa_g22974 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000933_P001 ZF14, Zm00001e000933 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Zm00001e003751_P001 Zm00001e003751 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e041426_P001 Zm00001e041426 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 46 206
IPR002528 MATE_fam 269 431
No external refs found!