Aliases : RPN5B, LOC_Os03g63430
Description : regulatory component RPN5 of 26S proteasome
Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00099p00018620 | RPN5B,... | Protein degradation.26S proteasome.regulatory... | 0.06 | OrthoFinder output from all 47 species | |
| AT5G09900 | EMB2107, MSA, RPN5A | 26S proteasome regulatory subunit, putative (RPN5) | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g082898 | EMB2107, MSA, RPN5A | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g30391 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12273 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01383 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13431 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0081.g038574 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z048700.1 | RPN5B, Ceric.1Z048700 | regulatory component *(RPN5) of 26S proteasome &... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021348.57 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.06 | OrthoFinder output from all 47 species | |
| Cre14.g632775 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.11 | OrthoFinder output from all 47 species | |
| Ehy_g03758 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01022276001 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_00178 | EMB2107, MSA, RPN5A | regulatory component RPN5 of 26S proteasome | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g28889 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10427293g0010 | RPN5B | regulatory component RPN5 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
| MA_10435598g0010 | EMB2107, MSA, RPN5A | regulatory component RPN5 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g06620.1 | RPN5B | regulatory component RPN5 of 26S proteasome | 0.09 | OrthoFinder output from all 47 species | |
| Nbi_g08616 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g04551 | EMB2107, MSA, RPN5A | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g17093 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g12287 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c10_9730V3.1 | RPN5B, Pp3c10_9730 | 26S proteasome regulatory subunit, putative (RPN5) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g012040.3.1 | RPN5B, Solyc04g012040 | regulatory component RPN5 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g051370.4.1 | RPN5B, Solyc04g051370 | regulatory component RPN5 of 26S proteasome | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g01849 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011647_P002 | RPN5B, Zm00001e011647 | regulatory component RPN5 of 26S proteasome | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e016264_P001 | RPN5B, Zm00001e016264 | regulatory component RPN5 of 26S proteasome | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| CC | GO:0000502 | proteasome complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0009894 | regulation of catabolic process | IEP | HCCA |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042176 | regulation of protein catabolic process | IEP | HCCA |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
| No external refs found! |
