Aliases : DER2.2, LOC_Os03g63520
Description : component DFM1 of ER-associated protein degradation (ERAD) machinery
Gene families : OG0003011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003011_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g63520.1 | |
| Cluster | HCCA: Cluster_157 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G04860 | DER2.2 | DERLIN-2.2 | 0.02 | OrthoFinder output from all 47 species | |
| Als_g36514 | DER2.2 | component *(DFM1) of ER-associated protein degradation... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g27661 | DER2.2 | component *(DFM1) of ER-associated protein degradation... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g19517 | DER2.2 | component *(DFM1) of ER-associated protein degradation... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05227 | DER2.2 | component *(DFM1) of ER-associated protein degradation... | 0.02 | OrthoFinder output from all 47 species | |
| MA_41880g0010 | DER2.2 | component DFM1 of ER-associated protein degradation... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06705 | DER2.2 | component *(DFM1) of ER-associated protein degradation... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g35040 | DER2.2 | component *(DFM1) of ER-associated protein degradation... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0042255 | ribosome assembly | IEP | HCCA |
| BP | GO:0042256 | cytosolic ribosome assembly | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0070925 | organelle assembly | IEP | HCCA |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007599 | DER1 | 12 | 211 |
| No external refs found! |
