LOC_Os04g01354.1 (CHS, TT4, ATCHS,...)


Aliases : CHS, TT4, ATCHS, LOC_Os04g01354

Description : Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase(50.2.3 : 474.0) & Chalcone synthase OS=Arabis alpina (sp|q9sep4|chsy_araal : 311.0)


Gene families : OG0000113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g01354.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Adi_g021338 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022305 LAP6 EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103189 LAP6 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03059 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07234 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31249 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43702 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24527 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29133 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28405 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67262 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18241.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19034.t1 LAP6, Aspi01Gene19034 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43969.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60641.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012322 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: CDS=17-1321 0.02 OrthoFinder output from all 47 species
Azfi_s0072.g037031 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: CDS=559-1407 0.02 OrthoFinder output from all 47 species
Azfi_s0334.g065481 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: CDS=222-1445 0.03 OrthoFinder output from all 47 species
Cba_g25082 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G062900.1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G063000.1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G063300.1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.37G035600.1 LAP6, Ceric.37G035600 EC_2.3 acyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g00999 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09329 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32434 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22138 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46942 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23537 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31091 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000521001 CHS, TT4, ATCHS Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species
GSVIVT01010556001 CHS, TT4, ATCHS Stilbene synthase 6 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01010561001 CHS, TT4, ATCHS Stilbene synthase 1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
GSVIVT01010563001 CHS, TT4, ATCHS Secondary metabolism.phenolics.flavonoid synthesis and... 0.04 OrthoFinder output from all 47 species
GSVIVT01010565001 CHS, TT4, ATCHS Secondary metabolism.phenolics.flavonoid synthesis and... 0.05 OrthoFinder output from all 47 species
GSVIVT01010568001 CHS, TT4, ATCHS Stilbene synthase 1 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01010570001 CHS, TT4, ATCHS Stilbene synthase 3 OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
GSVIVT01010589001 CHS, TT4, ATCHS Secondary metabolism.phenolics.flavonoid synthesis and... 0.04 OrthoFinder output from all 47 species
GSVIVT01010590001 CHS, TT4, ATCHS Secondary metabolism.phenolics.flavonoid synthesis and... 0.05 OrthoFinder output from all 47 species
GSVIVT01032968001 CHS, TT4, ATCHS Secondary metabolism.phenolics.flavonoid synthesis and... 0.02 OrthoFinder output from all 47 species
Gb_26726 CHS, TT4, ATCHS Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species
Gb_29977 LAP5 hydroxyalkyl alpha-pyrone synthase 0.02 OrthoFinder output from all 47 species
Gb_32469 CHS, TT4, ATCHS chalcone synthase 0.03 OrthoFinder output from all 47 species
Gb_35771 CHS, TT4, ATCHS chalcone synthase 0.02 OrthoFinder output from all 47 species
LOC_Os07g31750.1 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.03 OrthoFinder output from all 47 species
LOC_Os07g31770.1 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.04 OrthoFinder output from all 47 species
LOC_Os07g34140.1 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.04 OrthoFinder output from all 47 species
Len_g21880 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g38568 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10108064g0010 CHS, TT4, ATCHS Chalcone synthase 7 OS=Picea mariana... 0.02 OrthoFinder output from all 47 species
MA_10426264g0010 CHS, TT4, ATCHS Chalcone synthase OS=Pinus sylvestris... 0.03 OrthoFinder output from all 47 species
MA_10426264g0020 CHS, TT4, ATCHS chalcone synthase 0.03 OrthoFinder output from all 47 species
MA_10428225g0010 CHS, TT4, ATCHS Chalcone synthase OS=Pinus sylvestris... 0.02 OrthoFinder output from all 47 species
MA_2713011g0010 CHS, TT4, ATCHS Chalcone synthase OS=Pinus strobus (sp|o65872|chsy_pinst : 111.0) 0.03 OrthoFinder output from all 47 species
MA_84838g0010 CHS, TT4, ATCHS chalcone synthase 0.03 OrthoFinder output from all 47 species
MA_8673616g0010 CHS, TT4, ATCHS Chalcone synthase 7 OS=Picea mariana... 0.02 OrthoFinder output from all 47 species
Mp2g22780.1 CHS, TT4, ATCHS chalcone synthase 0.03 OrthoFinder output from all 47 species
Mp4g03580.1 CHS, TT4, ATCHS chalcone synthase 0.02 OrthoFinder output from all 47 species
Mp4g14220.1 CHS, TT4, ATCHS chalcone synthase 0.03 OrthoFinder output from all 47 species
Mp7g14890.1 CHS, TT4, ATCHS chalcone synthase 0.02 OrthoFinder output from all 47 species
Mp7g14930.1 CHS, TT4, ATCHS chalcone synthase 0.02 OrthoFinder output from all 47 species
Msp_g09714 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23752 LAP6 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39932 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21147 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c24_13090V3.1 CHS, TT4, ATCHS,... Chalcone and stilbene synthase family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s2936.g028503 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: CDS=1-1116 0.03 OrthoFinder output from all 47 species
Tin_g02562 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11123 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44720 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011163_P001 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species
Zm00001e011164_P001 CHS, TT4, ATCHS,... chalcone synthase 0.02 OrthoFinder output from all 47 species
Zm00001e012647_P001 LAP6, Zm00001e012647 hydroxyalkyl alpha-pyrone synthase 0.03 OrthoFinder output from all 47 species
Zm00001e017399_P001 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species
Zm00001e024223_P001 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species
Zm00001e024400_P001 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species
Zm00001e024402_P001 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012328 Chalcone/stilbene_synt_C 238 384
IPR001099 Chalcone/stilbene_synt_N 15 227
No external refs found!