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  5. LOC_Os04g07170.1

LOC_Os04g07170.1 (LOC_Os04g07170)


Aliases : LOC_Os04g07170

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g07170.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g03590.1 LOC_Os01g03590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g18550.1 LOC_Os01g18550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g24530.1 LOC_Os01g24530 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g33630.1 LOC_Os01g33630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g35254.1 ZAR1, LOC_Os01g35254 Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os01g36766.1 LOC_Os01g36766 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g38810.1 LOC_Os01g38810 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g24300.1 LOC_Os02g24300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g25520.1 LOC_Os02g25520 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g49290.1 LOC_Os02g49290 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os02g51230.1 LOC_Os02g51230 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g03350.1 LOC_Os04g03350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g03710.1 LOC_Os04g03710 Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g12390.1 LOC_Os04g12390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g20450.1 LOC_Os04g20450 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g26000.1 LOC_Os04g26000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g26410.1 LOC_Os04g26410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g03950.1 LOC_Os05g03950 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g16580.1 LOC_Os05g16580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g18990.1 LOC_Os05g18990 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g26100.1 LOC_Os05g26100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g39460.1 LOC_Os05g39460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g48100.1 LOC_Os05g48100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g50880.1 LOC_Os05g50880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g10380.1 LOC_Os06g10380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g15050.1 LOC_Os06g15050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g15850.1 EIN4, LOC_Os06g15850 Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os06g19310.1 LOC_Os06g19310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g21150.1 LOC_Os06g21150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g28370.1 LOC_Os06g28370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g35350.1 LOC_Os06g35350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g42670.1 LOC_Os06g42670 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g03350.1 LOC_Os07g03350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g32750.1 LOC_Os07g32750 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g46120.1 LOC_Os07g46120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g10230.1 LOC_Os08g10230 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g12280.1 LOC_Os08g12280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g13300.1 LOC_Os08g13300 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g24250.1 LOC_Os08g24250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g27180.1 LOC_Os08g27180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g01900.1 LOC_Os09g01900 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g04200.1 LOC_Os09g04200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g09150.1 LOC_Os09g09150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g09420.1 LOC_Os09g09420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g11060.1 LOC_Os09g11060 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g13900.1 LOC_Os09g13900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g17290.1 LOC_Os09g17290 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g20450.1 LOC_Os09g20450 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g25240.1 LOC_Os09g25240 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g37550.1 LOC_Os09g37550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g07562.1 LOC_Os10g07562 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g08360.1 LOC_Os10g08360 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g08370.1 LOC_Os10g08370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g08650.1 LOC_Os10g08650 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g29010.1 LOC_Os10g29010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g26250.1 LOC_Os11g26250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g43430.1 LOC_Os11g43430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g44100.1 LOC_Os11g44100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g45490.1 LOC_Os11g45490 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g01870.1 LOC_Os12g01870 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g03770.1 LOC_Os12g03770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g05240.1 LOC_Os12g05240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g13080.1 LOC_Os12g13080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g14650.1 LOC_Os12g14650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g14820.1 LOC_Os12g14820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g33060.1 PIN5, LOC_Os12g33060 auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
LOC_Os12g36480.1 LOC_Os12g36480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g37240.1 LOC_Os12g37240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 1012 1125
No external refs found!