LOC_Os04g08060.1 (LOC_Os04g08060)


Aliases : LOC_Os04g08060

Description : C2H2 zinc finger transcription factor


Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g08060.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00073930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00137p00104280 AZF3, ZF3,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AT2G28710 No alias C2H2-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT2G37430 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G46090 ZAT7 C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G60580 No alias C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
AT4G35280 No alias C2H2-like zinc finger protein 0.03 OrthoFinder output from all 47 species
AT5G04340 CZF2, ZAT6, C2H2 zinc finger of Arabidopsis thaliana 6 0.03 OrthoFinder output from all 47 species
AT5G04390 No alias C2H2-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT5G43170 AZF3, ZF3 zinc-finger protein 3 0.03 OrthoFinder output from all 47 species
AT5G59820 RHL41, ZAT12 C2H2-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g035726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19642 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Aop_g12593 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17174.t1 Aspi01Gene17174 regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21356.t1 Aspi01Gene21356 regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54086.t1 Aspi01Gene54086 regulatory protein *(DAZ) of male germ cell division &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene65801.t1 Aspi01Gene65801 regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Azfi_s0577.g078251 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Cba_g24559 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Ceric.13G042600.1 Ceric.13G042600 C2H2-type subclass ZAT transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g44471 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Dcu_g04905 No alias regulatory protein *(DAZ) of male germ cell division &... 0.04 OrthoFinder output from all 47 species
Dcu_g20034 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Ehy_g15214 AZF2, ZF2 C2H2-type subclass ZAT transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g19479 AZF2, ZF2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01023887001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_06485 No alias C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Gb_10420 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_16419 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Gb_40151 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g32220.1 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os11g47630.1 LOC_Os11g47630 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g09007 No alias regulatory protein *(DAZ) of male germ cell division &... 0.04 OrthoFinder output from all 47 species
Lfl_g17887 No alias C2H2-type subclass ZAT transcription factor & original... 0.07 OrthoFinder output from all 47 species
Lfl_g22314 No alias C2H2-type subclass ZAT transcription factor & original... 0.05 OrthoFinder output from all 47 species
MA_109421g0010 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_160930g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_167434g0010 No alias C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
MA_19127g0010 CZF2, ZAT6, C2H2 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_837209g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_85675g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_93487g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Pir_g18050 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Pir_g31008 ZAT10, STZ C2H2-type subclass ZAT transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011786 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Sam_g35489 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Solyc05g054650.1.1 Solyc05g054650 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g060740.3.1 Solyc06g060740 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g074800.1.1 Solyc06g074800 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc08g078590.1.1 Solyc08g078590 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Solyc09g008440.1.1 Solyc09g008440 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc11g073055.1.1 Solyc11g073055 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g073075.1.1 Solyc11g073075 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g15487 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Spa_g37939 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Zm00001e001253_P001 Zm00001e001253 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e002063_P001 AZF1, ZF1, Zm00001e002063 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e002344_P001 Zm00001e002344 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e003057_P001 AZF2, ZF2, Zm00001e003057 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e005777_P001 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e006181_P001 Zm00001e006181 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e011983_P001 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e028782_P001 Zm00001e028782 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e029605_P001 RHL41, ZAT12,... C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e038072_P001 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e038074_P001 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e038464_P001 Zm00001e038464 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!