LOC_Os04g08320.1 (LOC_Os04g08320)


Aliases : LOC_Os04g08320

Description : no hits & (original description: none)


Gene families : OG0003304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003304_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g08320.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT1G30890 No alias Integral membrane HRF1 family protein 0.03 OrthoFinder output from all 47 species
Ala_g13094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre17.g704550 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g15734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025346 No alias not classified & original description: CDS=1-1005 0.04 OrthoFinder output from all 47 species
Zm00001e025042_P001 Zm00001e025042 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR005578 Yif1_fam 54 275
No external refs found!