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  5. LOC_Os04g10410.1

LOC_Os04g10410.1 (LOC_Os04g10410)


Aliases : LOC_Os04g10410

Description : Probable amidase At4g34880 OS=Arabidopsis thaliana (sp|a0a1p8b760|ami4g_arath : 411.0)


Gene families : OG0004248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g10410.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00208990 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00213600 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00041p00215440 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00041p00216070 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT4G34880 No alias Amidase family protein 0.04 OrthoFinder output from all 47 species
Cba_g35121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g26821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024070001 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_24947 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g10569.1 LOC_Os04g10569 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g025994 No alias not classified & original description: CDS=1-1410 0.02 OrthoFinder output from all 47 species
Solyc11g071550.2.1 Solyc11g071550 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR023631 Amidase_dom 49 523
No external refs found!