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  5. LOC_Os04g10460.1

LOC_Os04g10460.1 (LOC_Os04g10460)


Aliases : LOC_Os04g10460

Description : Probable amidase At4g34880 OS=Arabidopsis thaliana (sp|a0a1p8b760|ami4g_arath : 443.0)


Gene families : OG0004248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g10460.1

Target Alias Description ECC score Gene Family Method Actions
Dac_g26821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024064001 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024068001 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_24946 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g10569.1 LOC_Os04g10569 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Smo172412 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g111210.3.1 Solyc01g111210 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc01g111220.3.1 Solyc01g111220 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc11g071550.2.1 Solyc11g071550 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR023631 Amidase_dom 45 440
No external refs found!