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  5. LOC_Os04g11780.1

LOC_Os04g11780.1 (LOC_Os04g11780)


Aliases : LOC_Os04g11780

Description : no description available(sp|f7j0n2|rga5r_orysj : 115.0)


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g11780.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00205p00026120 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.02 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.29 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
GSVIVT01012168001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01018564001 No alias Putative disease resistance RPP13-like protein 3... 0.04 OrthoFinder output from all 47 species
GSVIVT01024101001 RPP13 Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024114001 No alias External stimuli response.biotic stress.pathogen... 0.01 OrthoFinder output from all 47 species
GSVIVT01026728001 No alias Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01026740001 No alias Putative disease resistance protein At1g50180... 0.02 OrthoFinder output from all 47 species
GSVIVT01026745001 No alias Putative disease resistance protein At1g50180... 0.02 OrthoFinder output from all 47 species
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.02 OrthoFinder output from all 47 species
LOC_Os02g35210.1 LOC_Os02g35210 no description available(sp|q2r8l1|rga5s_orysj : 458.0) 0.06 OrthoFinder output from all 47 species
LOC_Os04g02860.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g14220.2 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os04g46300.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os07g12670.1 RPS2, LOC_Os07g12670 no description available(sp|f7j0n2|rga5r_orysj : 114.0) 0.01 OrthoFinder output from all 47 species
LOC_Os08g14810.1 ZAR1, LOC_Os08g14810 no description available(sp|p0do08|pikm2_orysj : 132.0) 0.07 OrthoFinder output from all 47 species
LOC_Os08g31780.1 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 415.0) 0.04 OrthoFinder output from all 47 species
LOC_Os09g09490.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g11960.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g11990.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os11g12000.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g12040.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os11g12050.2 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g12330.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g12340.2 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os11g12350.1 LOC_Os11g12350 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g13430.1 LOC_Os11g13430 no description available(sp|q2r8l1|rga5s_orysj : 385.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g13440.1 LOC_Os11g13440 no description available(sp|q2r8l1|rga5s_orysj : 304.0) 0.06 OrthoFinder output from all 47 species
LOC_Os11g16530.2 HRT, RCY1, RPP8,... no description available(sp|f7j0n2|rga5r_orysj : 285.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g17330.1 LOC_Os11g17330 no description available(sp|q2r8l1|rga5s_orysj : 391.0) 0.06 OrthoFinder output from all 47 species
LOC_Os11g41540.2 LOC_Os11g41540 Putative disease resistance protein At1g50180... 0.01 OrthoFinder output from all 47 species
LOC_Os12g17090.1 LOC_Os12g17090 no description available(sp|f7j0n2|rga5r_orysj : 305.0) 0.01 OrthoFinder output from all 47 species
LOC_Os12g17410.1 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 257.0) 0.01 OrthoFinder output from all 47 species
LOC_Os12g17480.1 LOC_Os12g17480 no description available(sp|q2r8l1|rga5s_orysj : 343.0) 0.05 OrthoFinder output from all 47 species
LOC_Os12g37760.1 LOC_Os12g37760 no description available(sp|p0do08|pikm2_orysj : 370.0) 0.03 OrthoFinder output from all 47 species
Solyc02g084890.3.1 ZAR1, Solyc02g084890 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g025820.1.1 RPP13, Solyc04g025820 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e008806_P001 Zm00001e008806 no description available(sp|q2r8l1|rga5s_orysj : 238.0) 0.03 OrthoFinder output from all 47 species
Zm00001e010878_P001 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 230.0) 0.02 OrthoFinder output from all 47 species
Zm00001e011093_P001 ZAR1, Zm00001e011093 no description available(sp|f7j0n2|rga5r_orysj : 358.0) 0.02 OrthoFinder output from all 47 species
Zm00001e011354_P001 Zm00001e011354 no description available(sp|p0do08|pikm2_orysj : 121.0) 0.04 OrthoFinder output from all 47 species
Zm00001e024479_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 76 176
No external refs found!