Aliases : LOC_Os04g16459
Description : no hits & (original description: none)
Gene families : OG0005895 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005895_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g16459.1 | |
| Cluster | HCCA: Cluster_33 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ChrSy.fgenesh.mRNA.52 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g04820.1 | LOC_Os02g04820 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g21980.1 | LOC_Os02g21980 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g45734.1 | LOC_Os03g45734 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g56040.1 | LOC_Os03g56040 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g21190.1 | LOC_Os08g21190 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g23200.1 | LOC_Os11g23200 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g31860.1 | LOC_Os11g31860 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g21540.1 | LOC_Os12g21540 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os12g21980.1 | LOC_Os12g21980 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005162 | Retrotrans_gag_dom | 82 | 171 |
| No external refs found! |
