LOC_Os04g16728.1 (LOC_Os04g16728)

Aliases : LOC_Os04g16728

Description : component psRPS15 of small ribosomal subunit proteome

Gene families : OG0011364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011364_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g16728.1
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
ATCG01120	RPS15	chloroplast ribosomal protein S15	0.14	OrthoFinder output from all 47 species
Ceric.05G047200.1	RPS15, Ceric.05G047200	component *(uS15c) of small plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Ceric.09G049200.1	RPS15, Ceric.09G049200	component *(uS15c) of small plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Ceric.18G052900.1	RPS15, Ceric.18G052900	component *(uS15c) of small plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Ceric.18G054800.1	RPS15, Ceric.18G054800	component *(uS15c) of small plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Ceric.19G009900.1	RPS15, Ceric.19G009900	component *(uS15c) of small plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Ceric.29G008800.1	RPS15, Ceric.29G008800	component *(uS15c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.33G037900.1	RPS15, Ceric.33G037900	component *(uS15c) of small plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Ceric.35G067900.1	RPS15, Ceric.35G067900	component *(uS15c) of small plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000589	Ribosomal_S15	17	88

External Links

No external refs found!

LOC_Os04g16728.1 (LOC_Os04g16728)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation