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  5. LOC_Os04g21130.1

LOC_Os04g21130.1 (ATPP2-B11, PP2-B11,...)


Aliases : ATPP2-B11, PP2-B11, LOC_Os04g21130

Description : Putative F-box protein PP2-B12 OS=Arabidopsis thaliana (sp|q9flu7|p2b12_arath : 125.0)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g21130.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT5G52120 PP2-A14, AtPP2-A14 phloem protein 2-A14 0.03 OrthoFinder output from all 47 species
MA_134768g0010 AtPP2-B6, PP2-B6 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc01g099990.3.1 PP2-B15,... F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 127 321
No external refs found!