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  5. LOC_Os04g23250.1

LOC_Os04g23250.1 (LOC_Os04g23250)


Aliases : LOC_Os04g23250

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g23250.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g04140.1 LOC_Os01g04140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g20190.1 LOC_Os01g20190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g36766.1 LOC_Os01g36766 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os02g25560.1 LOC_Os02g25560 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os02g37730.1 LOC_Os02g37730 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os03g27520.1 LOC_Os03g27520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g27860.1 LOC_Os03g27860 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g54020.1 LOC_Os03g54020 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g07980.1 LOC_Os04g07980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g22840.1 LOC_Os04g22840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g25590.1 LOC_Os04g25590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g14000.1 LOC_Os05g14000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g14460.1 LOC_Os05g14460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g39460.1 LOC_Os05g39460 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g10380.1 LOC_Os06g10380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g42580.1 LOC_Os06g42580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g03350.1 LOC_Os07g03350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g09540.1 LOC_Os07g09540 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os07g30750.1 LOC_Os07g30750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g12280.1 LOC_Os08g12280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g16080.1 LOC_Os08g16080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g24250.1 LOC_Os08g24250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g01900.1 LOC_Os09g01900 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os09g09060.1 LOC_Os09g09060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g09150.1 LOC_Os09g09150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g11060.1 LOC_Os09g11060 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os10g16800.1 LOC_Os10g16800 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os11g23810.1 LOC_Os11g23810 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os11g31180.1 LOC_Os11g31180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g01640.1 LOC_Os12g01640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g22910.1 LOC_Os12g22910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g24680.1 LOC_Os12g24680 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g26070.1 LOC_Os12g26070 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g28740.1 LOC_Os12g28740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g37240.1 LOC_Os12g37240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 736 841
No external refs found!