Aliases : LOC_Os04g25590
Description : no hits & (original description: none)
Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g25590.1 | |
| Cluster | HCCA: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ChrUn.fgenesh.mRNA.16 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g07820.1 | LOC_Os01g07820 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g18550.1 | LOC_Os01g18550 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g19960.1 | LOC_Os01g19960 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g20190.1 | LOC_Os01g20190 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g21490.1 | LOC_Os01g21490 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g24530.1 | LOC_Os01g24530 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g29710.1 | LOC_Os01g29710 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g33630.1 | LOC_Os01g33630 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g34360.1 | LOC_Os01g34360 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g36766.1 | LOC_Os01g36766 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g38810.1 | LOC_Os01g38810 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g46330.1 | LOC_Os01g46330 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g71910.1 | LOC_Os01g71910 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g74210.1 | LOC_Os01g74210 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g01420.1 | LOC_Os02g01420 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g08280.1 | LOC_Os02g08280 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g16590.1 | LOC_Os02g16590 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g24310.1 | LOC_Os02g24310 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g25370.1 | LOC_Os02g25370 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g25520.1 | LOC_Os02g25520 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g25560.1 | LOC_Os02g25560 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g51230.1 | LOC_Os02g51230 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g27520.1 | LOC_Os03g27520 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g27860.1 | LOC_Os03g27860 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g30080.1 | LOC_Os03g30080 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g43280.1 | LOC_Os03g43280 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g54020.1 | LOC_Os03g54020 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os04g06100.1 | LOC_Os04g06100 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g19000.1 | LOC_Os04g19000 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g20450.1 | LOC_Os04g20450 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g22840.1 | LOC_Os04g22840 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g23250.1 | LOC_Os04g23250 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g23280.1 | LOC_Os04g23280 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g28650.1 | LOC_Os04g28650 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g29440.1 | LOC_Os04g29440 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g34820.1 | LOC_Os04g34820 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g43590.1 | LOC_Os04g43590 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g03950.1 | LOC_Os05g03950 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g18570.1 | LOC_Os05g18570 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g18990.1 | LOC_Os05g18990 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g19700.1 | LOC_Os05g19700 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g26100.1 | LOC_Os05g26100 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g27860.1 | LOC_Os05g27860 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g39460.1 | LOC_Os05g39460 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g50880.1 | LOC_Os05g50880 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g10380.1 | LOC_Os06g10380 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os06g15340.1 | LOC_Os06g15340 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g15850.1 | EIN4, LOC_Os06g15850 | Ethylene receptor 4 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g16540.1 | LOC_Os06g16540 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g19310.1 | LOC_Os06g19310 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g21000.1 | LOC_Os06g21000 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g21150.1 | LOC_Os06g21150 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g35350.1 | LOC_Os06g35350 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g42500.1 | LOC_Os06g42500 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g42580.1 | LOC_Os06g42580 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g03440.1 | LOC_Os07g03440 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g09540.1 | LOC_Os07g09540 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g15800.1 | LOC_Os07g15800 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g17510.1 | LOC_Os07g17510 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g30750.1 | LOC_Os07g30750 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g32750.1 | LOC_Os07g32750 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g34090.1 | LOC_Os07g34090 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g34200.1 | LOC_Os07g34200 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g46120.1 | LOC_Os07g46120 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g03730.1 | LOC_Os08g03730 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os08g04870.1 | LOC_Os08g04870 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g08950.1 | LOC_Os08g08950 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g10230.1 | LOC_Os08g10230 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g11300.1 | LOC_Os08g11300 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g16080.1 | LOC_Os08g16080 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g17120.1 | LOC_Os08g17120 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g24250.1 | LOC_Os08g24250 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g24590.1 | LOC_Os08g24590 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g26280.1 | LOC_Os08g26280 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g27180.1 | LOC_Os08g27180 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g01900.1 | LOC_Os09g01900 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g06700.1 | LOC_Os09g06700 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g09150.1 | LOC_Os09g09150 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g09420.1 | LOC_Os09g09420 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g11060.1 | LOC_Os09g11060 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g13560.1 | LOC_Os09g13560 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g14260.1 | LOC_Os09g14260 | Glutathione S-transferase T3 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g15610.1 | LOC_Os09g15610 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g16890.1 | LOC_Os09g16890 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g20130.1 | LOC_Os09g20130 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os09g20160.1 | LOC_Os09g20160 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g20450.1 | LOC_Os09g20450 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g25240.1 | LOC_Os09g25240 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g25360.1 | LOC_Os09g25360 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g07554.1 | LOC_Os10g07554 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g07562.1 | LOC_Os10g07562 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g08360.1 | LOC_Os10g08360 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g08650.1 | LOC_Os10g08650 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g16800.1 | LOC_Os10g16800 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g33480.1 | LOC_Os10g33480 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g03950.1 | LOC_Os11g03950 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g10440.1 | LOC_Os11g10440 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g14350.1 | LOC_Os11g14350 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g17410.1 | LOC_Os11g17410 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g19550.1 | LOC_Os11g19550 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g23810.1 | LOC_Os11g23810 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os11g24870.1 | LOC_Os11g24870 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g31180.1 | LOC_Os11g31180 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g35762.1 | LOC_Os11g35762 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g38456.1 | LOC_Os11g38456 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g40960.1 | LOC_Os11g40960 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g44100.1 | LOC_Os11g44100 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g45490.1 | LOC_Os11g45490 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g01640.1 | LOC_Os12g01640 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g01870.1 | LOC_Os12g01870 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g11600.1 | LOC_Os12g11600 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g13080.1 | LOC_Os12g13080 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g14200.1 | LOC_Os12g14200 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g14820.1 | LOC_Os12g14820 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g16400.1 | LOC_Os12g16400 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g23240.1 | LOC_Os12g23240 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g24680.1 | LOC_Os12g24680 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os12g25300.1 | LOC_Os12g25300 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g26070.1 | LOC_Os12g26070 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g28410.1 | LOC_Os12g28410 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g28740.1 | LOC_Os12g28740 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g33060.1 | PIN5, LOC_Os12g33060 | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g36480.1 | LOC_Os12g36480 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g37240.1 | LOC_Os12g37240 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0015074 | DNA integration | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
