Aliases : LOC_Os04g28280
Description : transcription factor (bHLH). transcriptional regulator (CIB)
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00241810 | CIB1,... | External stimuli response.light.UV-A/blue... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G09530 | PIF3, POC1, PAP3 | phytochrome interacting factor 3 | 0.01 | OrthoFinder output from all 47 species | |
| AT2G46970 | PIL1 | phytochrome interacting factor 3-like 1 | 0.01 | OrthoFinder output from all 47 species | |
| AT3G21330 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT3G50330 | HEC2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT4G09180 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
| AT4G28790 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G28800 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G37800 | ATRSL1, RSL1 | RHD SIX-LIKE 1 | 0.01 | OrthoFinder output from all 47 species | |
| AT5G67060 | HEC1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g058340 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g20444 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g04401 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06024 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g08145 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32315 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g37127 | SPT | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g49595 | LRL3 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g61540 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g31589 | RSL4 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21794 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene28550.t1 | CIB1, Aspi01Gene28550 | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene29543.t2 | Aspi01Gene29543 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene49717.t1 | LRL3, Aspi01Gene49717 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013132 | No alias | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0056.g034059 | RHD6 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g77017 | PIL1 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.04G092700.1 | Ceric.04G092700 | bHLH-type transcription factor & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.19G069900.1 | LRL3, Ceric.19G069900 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z051300.1 | LRL3, Ceric.1Z051300 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G021400.1 | CIB5, Ceric.22G021400 | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.33G061700.1 | SPT, Ceric.33G061700 | bHLH-type transcription factor & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g13389 | No alias | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g16940 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g09172 | No alias | regulatory protein (CIB) of blue light perception &... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g08656 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31215 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01018164001 | UNE10 | Transcription factor UNE10 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01018165001 | UNE10 | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021032001 | No alias | External stimuli response.light.UV-A/blue... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01032055001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g61480.1 | LOC_Os01g61480 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g47660.1 | CIB1, LOC_Os02g47660 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g48060.1 | RHD6, LOC_Os02g48060 | transcription factor (bHLH) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os06g47980.1 | LOC_Os06g47980 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os11g25560.1 | LOC_Os11g25560 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19799 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g22408 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g40022 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g13241 | No alias | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g24040 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g01031 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03137 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g09354 | No alias | regulatory protein (CIB) of blue light perception &... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g18394 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44492 | No alias | regulatory protein (CIB) of blue light perception &... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g06619 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g18288 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60433 | SPT | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g05994 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g03791 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000117 | LRL3 | bHLH-type transcription factor & original description: CDS=18-674 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g011925 | HEC2 | bHLH-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g43944 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g091440.2.1 | RHD6, Solyc02g091440 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc02g093280.2.1 | SPT, Solyc02g093280 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g057710.4.1 | Solyc09g057710 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14752 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g18981 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g37930 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g10179 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009823_P002 | LRL1, Zm00001e009823 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e015045_P002 | Zm00001e015045 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e015610_P001 | RHD6, Zm00001e015610 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019392_P001 | Zm00001e019392 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 91 | 138 |
| No external refs found! |
