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  5. LOC_Os04g33930.1

LOC_Os04g33930.1 (LOC_Os04g33930)


Aliases : LOC_Os04g33930

Description : no hits & (original description: none)


Gene families : OG0001986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g33930.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00140200 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00024p00141270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G37870 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G53980 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT5G05960 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Aev_g19804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19344.t1 Aspi01Gene19344 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36447.t1 Aspi01Gene36447 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g10807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011567001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01016435001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01034065001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_04112 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_14415 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_33827 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_104866g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_188576g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_20322g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_222427g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_230960g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_342670g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9997092g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g23320.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g36795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c11_2470V3.1 Pp3c11_2470 Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
Pp3c22_13039V3.1 Pp3c22_13039 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c7_3350V3.1 Pp3c7_3350 Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 OrthoFinder output from all 47 species
Pp3s51_120V3.1 Pp3s51_120 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Pp3s51_150V3.1 Pp3s51_150 Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 OrthoFinder output from all 47 species
Pp3s51_180V3.1 Pp3s51_180 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Pp3s51_220V3.1 Pp3s51_220 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Pp3s51_280V3.1 Pp3s51_280 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Sam_g36463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g079880.4.1 Solyc03g079880 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc05g041140.4.1 Solyc05g041140 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g036230.4.1 Solyc06g036230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g018480.1.1 Solyc10g018480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g02936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008179_P001 Zm00001e008179 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e008958_P001 Zm00001e008958 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e023417_P001 Zm00001e023417 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 14 113
No external refs found!