Aliases : LOC_Os04g35610
Description : RNA editing factor (SLO2)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00268120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00004p00076010 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G69350 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G03380 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G01580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G09040 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G49142 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G19191 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02126 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g32627 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21679 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g15602 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g15766 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19032 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05192 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07361 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08796 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09616 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18330 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g26341 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g29893 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g38090 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68032 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14090.t1 | Aspi01Gene14090 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.37G044800.1 | Ceric.37G044800 | not classified & original description: pacid=50617007... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g23963 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36025 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36991 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g44865 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g48675 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g48863 | CRR2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05938 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28884 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g38000 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g51270 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19916 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24510 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01005577001 | EMB2261 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011501001 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01027525001 | LPA66 | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g41650.1 | LOC_Os01g41650 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g46230.1 | MEF1, LOC_Os01g46230 | RNA editing factor (MEF1) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g09800.1 | OTP82, LOC_Os02g09800 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g63560.1 | LOC_Os03g63560 | OTP70 plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g23960.1 | LOC_Os05g23960 | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g39090.1 | LOC_Os07g39090 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g06490.2 | SLO1, LOC_Os08g06490 | Pentatricopeptide repeat-containing protein At4g22760... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g08140.1 | LOC_Os12g08140 | Pentatricopeptide repeat-containing protein At2g33760... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03325 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04760 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05423 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08485 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18962 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28084 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g33510 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g33765 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g34141 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g54178 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g12681 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g39947 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_139163g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_38395g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g04990.1 | PTAC9, OSB2 | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g46079 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48594 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g24617 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12874 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g15182 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07203 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28758 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51734 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51760 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo52548 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g108180.4.1 | Solyc01g108180 | RNA editing factor (MEF8). RNA editing factor (BLX) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g046280.3.1 | Solyc05g046280 | RNA editing factor (MEF13) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g064600.1.1 | Solyc06g064600 | Pentatricopeptide repeat-containing protein At1g56690,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g053520.2.1 | SLO1, Solyc07g053520 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001007_P001 | Zm00001e001007 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014549_P001 | CRR22, Zm00001e014549 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018346_P001 | Zm00001e018346 | Pentatricopeptide repeat-containing protein At3g29230... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020583_P001 | Zm00001e020583 | Pentatricopeptide repeat-containing protein At2g33680... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030605_P001 | Zm00001e030605 | Pentatricopeptide repeat-containing protein At1g31430... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034478_P001 | Zm00001e034478 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e037600_P001 | Zm00001e037600 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039394_P003 | Zm00001e039394 | Pentatricopeptide repeat-containing protein At5g04780,... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 114 | 140 |
| IPR002885 | Pentatricopeptide_repeat | 526 | 551 |
| IPR002885 | Pentatricopeptide_repeat | 54 | 79 |
| IPR002885 | Pentatricopeptide_repeat | 288 | 310 |
| IPR002885 | Pentatricopeptide_repeat | 426 | 449 |
| IPR002885 | Pentatricopeptide_repeat | 82 | 105 |
| IPR002885 | Pentatricopeptide_repeat | 212 | 259 |
| IPR002885 | Pentatricopeptide_repeat | 344 | 393 |
| IPR002885 | Pentatricopeptide_repeat | 452 | 498 |
| No external refs found! |
