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  5. LOC_Os04g36660.1

LOC_Os04g36660.1 (LOC_Os04g36660)


Aliases : LOC_Os04g36660

Description : Calmodulin-binding protein 60 B OS=Arabidopsis thaliana (sp|q9fkl6|cb60b_arath : 662.0)


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g36660.1

Target Alias Description ECC score Gene Family Method Actions
AT2G24300 No alias Calmodulin-binding protein 0.03 OrthoFinder output from all 47 species
AT5G62570 No alias Calmodulin binding protein-like 0.03 OrthoFinder output from all 47 species
Adi_g016576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052527 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Adi_g074758 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Adi_g074759 No alias regulatory protein *(CBP60) of systemic acquired... 0.05 OrthoFinder output from all 47 species
Ceric.30G012100.1 Ceric.30G012100 regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Dde_g38611 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
GSVIVT01003722001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01003724001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_40744 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36110.1 LOC_Os12g36110 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g05644 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
MpVg00510.1 No alias No annotation 0.02 OrthoFinder output from all 47 species
Ore_g25576 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ppi_g02308 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Sam_g15745 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Sam_g30187 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Sam_g30188 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Sam_g34269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079040.3.1 Solyc02g079040 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g113920.4.1 Solyc03g113920 Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc07g006830.4.1 Solyc07g006830 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR012416 CBP60 104 395
No external refs found!