LOC_Os04g38310.1 (LOC_Os04g38310)


Aliases : LOC_Os04g38310

Description : no hits & (original description: none)


Gene families : OG0001287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001287_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g38310.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00180440 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G35780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
AT1G78150 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT4G39860 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g060358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01765 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g09321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11457 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g51289 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g21894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02125 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g39015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g69796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G061200.1 Ceric.01G061200 not classified & original description: pacid=50591052... 0.03 OrthoFinder output from all 47 species
Ceric.01G061300.1 Ceric.01G061300 not classified & original description: pacid=50591700... 0.03 OrthoFinder output from all 47 species
Ceric.03G036400.1 Ceric.03G036400 not classified & original description: pacid=50572452... 0.06 OrthoFinder output from all 47 species
Ceric.07G018800.1 Ceric.07G018800 not classified & original description: pacid=50626140... 0.12 OrthoFinder output from all 47 species
Ceric.35G024200.1 Ceric.35G024200 not classified & original description: pacid=50580845... 0.03 OrthoFinder output from all 47 species
Dac_g15149 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g05360 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01009018001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_24849 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g14907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g39714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_13107g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g05870.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g27507 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g02771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10098 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013635 No alias not classified & original description: CDS=390-1235 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015278 No alias not classified & original description: CDS=1-1089 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020368 No alias not classified & original description: CDS=155-916 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021901 No alias not classified & original description: CDS=192-1037 0.04 OrthoFinder output from all 47 species
Sam_g26906 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g38636 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g50783 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g055160.3.1 Solyc04g055160 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g073970.4.1 Solyc04g073970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g051970.4.1 Solyc05g051970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g06610 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007936_P001 Zm00001e007936 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e010809_P001 Zm00001e010809 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040993_P001 Zm00001e040993 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025131 DUF4057 3 303
No external refs found!