LOC_Os04g38340.1 (LOC_Os04g38340)


Aliases : LOC_Os04g38340

Description : Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana (sp|q9t042|pdi54_arath : 95.5)


Gene families : OG0002619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002619_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g38340.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Adi_g025567 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.03 OrthoFinder output from all 47 species
Aev_g07101 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009215 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000691.11 No alias Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre13.g579850 No alias Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g32046 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.02 OrthoFinder output from all 47 species
Dcu_g03776 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.07 OrthoFinder output from all 47 species
Lfl_g19206 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.06 OrthoFinder output from all 47 species
MA_56684g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g20597 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.02 OrthoFinder output from all 47 species
Ore_g09171 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.05 OrthoFinder output from all 47 species
Pir_g00554 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007947 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.03 OrthoFinder output from all 47 species
Solyc04g072910.3.1 Solyc04g072910 Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g02603 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-A)... 0.02 OrthoFinder output from all 47 species
Zm00001e001510_P002 Zm00001e001510 Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Zm00001e007933_P001 Zm00001e007933 Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana... 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR012936 Erv_C 149 366
IPR039542 Erv_N 8 97
No external refs found!