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  5. LOC_Os04g40410.1

LOC_Os04g40410.1 (ATNRT3.1, NRT3.1,...)


Aliases : ATNRT3.1, NRT3.1, WR3, LOC_Os04g40410

Description : regulatory factor NRT3 of nitrate uptake system


Gene families : OG0001863 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001863_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g40410.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00207930 ATNRT3.1,... Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.06 OrthoFinder output from all 47 species
AMTR_s00174p00057530 ATNRT3.1,... Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.03 OrthoFinder output from all 47 species
AT5G50200 ATNRT3.1, NRT3.1, WR3 nitrate transmembrane transporters 0.07 OrthoFinder output from all 47 species
Ala_g00826 ATNRT3.1, NRT3.1, WR3 regulatory factor *(NRT3) of nitrate uptake system &... 0.04 OrthoFinder output from all 47 species
Als_g00485 ATNRT3.1, NRT3.1, WR3 regulatory factor *(NRT3) of nitrate uptake system &... 0.04 OrthoFinder output from all 47 species
Aop_g31636 ATNRT3.1, NRT3.1, WR3 regulatory factor *(NRT3) of nitrate uptake system &... 0.02 OrthoFinder output from all 47 species
Cba_g08305 No alias regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Ceric.04G014600.1 ATNRT3.1,... regulatory factor *(NRT3) of nitrate uptake system &... 0.06 OrthoFinder output from all 47 species
Ceric.1Z201800.1 ATNRT3.1,... regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z214700.1 ATNRT3.1,... regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Ceric.26G045800.1 Ceric.26G045800 regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Ceric.27G020500.1 ATNRT3.1,... regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Dde_g42224 ATNRT3.1, NRT3.1, WR3 regulatory factor *(NRT3) of nitrate uptake system &... 0.06 OrthoFinder output from all 47 species
MA_11774g0010 ATNRT3.1, NRT3.1, WR3 regulatory factor NRT3 of nitrate uptake system 0.03 OrthoFinder output from all 47 species
Mp4g03070.1 ATNRT3.1, NRT3.1, WR3 regulatory factor NRT3 of nitrate uptake system 0.02 OrthoFinder output from all 47 species
Mp4g22660.1 ATNRT3.1, NRT3.1, WR3 regulatory factor NRT3 of nitrate uptake system 0.05 OrthoFinder output from all 47 species
Mp4g22690.1 No alias regulatory factor NRT3 of nitrate uptake system 0.02 OrthoFinder output from all 47 species
Mp4g22710.1 ATNRT3.1, NRT3.1, WR3 regulatory factor NRT3 of nitrate uptake system 0.03 OrthoFinder output from all 47 species
Mp4g22870.1 No alias regulatory factor NRT3 of nitrate uptake system 0.05 OrthoFinder output from all 47 species
Msp_g03054 ATNRT3.1, NRT3.1, WR3 regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Pnu_g03107 ATNRT3.1, NRT3.1, WR3 regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Ppi_g21552 ATNRT3.1, NRT3.1, WR3 regulatory factor *(NRT3) of nitrate uptake system &... 0.02 OrthoFinder output from all 47 species
Ppi_g31806 No alias regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Ppi_g52616 No alias regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Sam_g13071 No alias regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Smo227648 ATNRT3.1, NRT3.1, WR3 Nutrient uptake.nitrogen assimilation.nitrate uptake... 0.02 OrthoFinder output from all 47 species
Spa_g08713 No alias regulatory factor *(NRT3) of nitrate uptake system &... 0.04 OrthoFinder output from all 47 species
Spa_g08714 No alias regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Tin_g27504 No alias regulatory factor *(NRT3) of nitrate uptake system &... 0.03 OrthoFinder output from all 47 species
Zm00001e015013_P001 ATNRT3.1,... regulatory factor NRT3 of nitrate uptake system 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010167 response to nitrate IEA Interproscan
BP GO:0015706 nitrate transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR016605 Transptr_NO3_Nar2 39 208
No external refs found!