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  5. LOC_Os04g44060.1

LOC_Os04g44060.1 (PIP2B, PIP2;2, LOC_Os04g44060)


Aliases : PIP2B, PIP2;2, LOC_Os04g44060

Description : plasma membrane intrinsic protein (PIP)


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g44060.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00151600 DELTA-TIP2,... Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 OrthoFinder output from all 47 species
AMTR_s00155p00061840 PIP2B, PIP2;2,... Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
Aev_g09418 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28128 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Ala_g24064 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene24176.t1 PIP3B, PIP2;8,... plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0509.g074699 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Cba_g22248 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G055300.1 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g02004 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17587 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04391 TIP1;2, TIP2,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032861001 PIP1;5, PIP1D Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
Gb_03237 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Gb_17413 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
LOC_Os01g74450.1 ATTIP1.3,... tonoplast intrinsic protein (TIP) 0.04 OrthoFinder output from all 47 species
LOC_Os02g44630.1 PIP1;5, PIP1D,... plasma membrane intrinsic protein (PIP) 0.05 OrthoFinder output from all 47 species
MA_10289712g0010 PIP3B, PIP2;8 Probable aquaporin PIP2-8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_175978g0010 GAMMA-TIP,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
MA_250996g0010 ATTIP2;1,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g04190.1 GAMMA-TIP,... tonoplast intrinsic protein (TIP) 0.04 OrthoFinder output from all 47 species
Mp1g28620.1 TMP-C, PIP1;4, PIP1E plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Mp2g13930.1 PIP1C, TMP-B, PIP1;3 plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Mp4g04460.1 PIP3, SIMIP,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Mp4g04470.1 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Mp4g17210.1 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein (PIP) 0.05 OrthoFinder output from all 47 species
Msp_g47455 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Pir_g59553 BETA-TIP tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0184.g024967 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original... 0.02 OrthoFinder output from all 47 species
Smo271415 PIP1A, PIP1;1,... Solute transport.channels.MIP family.plasma membrane... 0.05 OrthoFinder output from all 47 species
Solyc03g096290.3.1 TMP-C, PIP1;4,... plasma membrane intrinsic protein (PIP) 0.08 OrthoFinder output from all 47 species
Solyc06g060760.3.1 DELTA-TIP2,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Solyc06g075650.3.1 ATTIP1.3,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Spa_g10243 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Spa_g56926 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e009547_P001 PIP2B, PIP2;2,... plasma membrane intrinsic protein (PIP) 0.06 OrthoFinder output from all 47 species
Zm00001e015168_P001 PIP2;1, PIP2,... plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
Zm00001e023164_P002 DELTA-TIP3,... tonoplast intrinsic protein (TIP) 0.05 OrthoFinder output from all 47 species
Zm00001e027152_P001 TIP4;1, Zm00001e027152 tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Zm00001e033411_P002 PIP2;1, PIP2,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Zm00001e036141_P001 TMP-C, PIP1;4,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 34 271
No external refs found!