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  5. LOC_Os04g45650.2

LOC_Os04g45650.2 (GATA5, LOC_Os04g45650)


Aliases : GATA5, LOC_Os04g45650

Description : transcription factor (GATA)


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45650.2
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00074220 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00250380 GATA23,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT4G16141 No alias GATA type zinc finger transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT5G26930 GATA23 GATA transcription factor 23 0.03 OrthoFinder output from all 47 species
AT5G66320 GATA5 GATA transcription factor 5 0.02 OrthoFinder output from all 47 species
Adi_g057963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058313 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098113 No alias transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03153 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17574 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13178 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13992 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09936 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09937 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11283 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48899 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52135 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05872 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30025.t1 GATA5, Aspi01Gene30025 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33196.t1 GATA12, Aspi01Gene33196 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60517.t1 GATA20, Aspi01Gene60517 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64140.t1 GATA4, Aspi01Gene64140 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67105.t1 GATA5, Aspi01Gene67105 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69106.t1 GATA4, Aspi01Gene69106 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0078.g038241 GATA4 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g04557 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05826 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G063400.1 GATA12, Ceric.07G063400 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G054000.1 GATA5, Ceric.17G054000 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.18G043900.1 GATA15, Ceric.18G043900 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.34G071700.1 GATA5, Ceric.34G071700 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.35G025300.1 GATA20, Ceric.35G025300 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G061000.1 GATA12, Ceric.36G061000 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001094.21 GATA7 RNA biosynthesis.transcriptional activation.C2C2... 0.01 OrthoFinder output from all 47 species
Dac_g10781 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01502 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04522 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06887 GATA2 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07436 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06602 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06867 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08197 GATA1 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08339 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22706 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017011001 GATA12 RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
GSVIVT01018180001 GATA4 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01033385001 GATA9 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01035614001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 OrthoFinder output from all 47 species
Gb_13387 GATA9 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Gb_25568 GATA20 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Len_g12686 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03183 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436047g0010 GATA17 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Msp_g37564 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02094 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g34157 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26719 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14533 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09627 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079 GATA9 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015681 GATA12 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016909 GATA9 transcription factor *(A/B-GATA) & original description:... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023073 GATA9 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025334 GATA12 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g08124 No alias transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g085190.2.1 HAN, MNP,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc03g033660.4.1 GATA5, Solyc03g033660 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Solyc05g056120.3.1 BME3-ZF, BME3,... transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Spa_g12632 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29134 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30606 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002326_P001 GATA4, Zm00001e002326 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e005940_P001 GATA4, Zm00001e005940 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Zm00001e006272_P001 GATA17, Zm00001e006272 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
Zm00001e007391_P002 GATA5, Zm00001e007391 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Zm00001e015260_P001 GATA5, Zm00001e015260 transcription factor (GATA) 0.11 OrthoFinder output from all 47 species
Zm00001e016165_P001 BME3-ZF, BME3,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e018438_P001 GATA4, Zm00001e018438 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e023650_P003 BME3-ZF, BME3,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e026256_P001 GATA23, Zm00001e026256 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e039467_P001 GATA14, Zm00001e039467 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e041332_P001 GATA5, Zm00001e041332 transcription factor (GATA) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 291 325
No external refs found!