LOC_Os04g45834.1 (LOC_Os04g45834)


Aliases : LOC_Os04g45834

Description : no hits & (original description: none)


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45834.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00028850 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT2G28400 No alias Protein of unknown function, DUF584 0.05 OrthoFinder output from all 47 species
AT3G45210 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
AT4G26950 No alias Protein of unknown function, DUF584 0.04 OrthoFinder output from all 47 species
AT5G60680 No alias Protein of unknown function, DUF584 0.04 OrthoFinder output from all 47 species
Adi_g003804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g031952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g04536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39036.t1 Aspi01Gene39036 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45725.t1 Aspi01Gene45725 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45725.t2 Aspi01Gene45725 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0019.g015103 No alias not classified & original description: CDS=51-1124 0.05 OrthoFinder output from all 47 species
Cba_g03100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G107800.1 Ceric.02G107800 not classified & original description: pacid=50585116... 0.04 OrthoFinder output from all 47 species
Ceric.1Z000200.1 Ceric.1Z000200 not classified & original description: pacid=50640947... 0.04 OrthoFinder output from all 47 species
Ceric.21G020100.1 Ceric.21G020100 not classified & original description: pacid=50603989... 0.05 OrthoFinder output from all 47 species
Ceric.29G056400.1 Ceric.29G056400 not classified & original description: pacid=50624938... 0.03 OrthoFinder output from all 47 species
Ceric.32G006200.1 Ceric.32G006200 not classified & original description: pacid=50597859... 0.05 OrthoFinder output from all 47 species
Dac_g11005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01038612001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os04g33760.1 LOC_Os04g33760 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g33270.1 LOC_Os07g33270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g27350.1 LOC_Os10g27350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g07650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35640 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_2588g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_359496g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_441447g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5080831g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_88194g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g22078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33595 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02384 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g05667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005504 No alias not classified & original description: CDS=1-846 0.03 OrthoFinder output from all 47 species
Smo413288 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g032800.1.1 Solyc02g032800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g080510.1.1 Solyc02g080510 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g05557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010473_P001 Zm00001e010473 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e012668_P001 Zm00001e012668 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015167_P001 Zm00001e015167 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035093_P001 Zm00001e035093 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e041345_P001 Zm00001e041345 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 35 208
No external refs found!