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  5. LOC_Os04g47220.1

LOC_Os04g47220.1 (PIP1;5, PIP1D, LOC_Os04g47220)


Aliases : PIP1;5, PIP1D, LOC_Os04g47220

Description : plasma membrane intrinsic protein (PIP)


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g47220.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00231200 TMP-C, PIP1;4,... Solute transport.channels.MIP family.plasma membrane... 0.04 OrthoFinder output from all 47 species
AMTR_s00152p00041700 PIP3, SIMIP,... Solute transport.channels.MIP family.plasma membrane... 0.02 OrthoFinder output from all 47 species
AT5G60660 PIP2;4, PIP2F plasma membrane intrinsic protein 2;4 0.03 OrthoFinder output from all 47 species
Aev_g09331 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35092 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Als_g02283 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene71840.t1 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G093900.1 PIP2;1, PIP2,... plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04457 PIP1C, TMP-B, PIP1;3 plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g10414 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018189001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 OrthoFinder output from all 47 species
GSVIVT01018678001 TIP5;1 Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 OrthoFinder output from all 47 species
GSVIVT01019743001 PIP1C, TMP-B, PIP1;3 Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
GSVIVT01032861001 PIP1;5, PIP1D Solute transport.channels.MIP family.plasma membrane... 0.02 OrthoFinder output from all 47 species
Gb_02400 ATTIP2;1,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
Mp1g04200.1 ATTIP1.3,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
Mp1g20890.1 ATTIP2;1,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
Mp2g13930.1 PIP1C, TMP-B, PIP1;3 plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Nbi_g00359 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07274 TMP-C, PIP1;4, PIP1E plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Ore_g10060 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00592 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05016 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10546 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Solyc09g007760.4.1 PIP2;1, PIP2,... plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
Spa_g10243 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e012616_P002 BETA-TIP, Zm00001e012616 tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000425 MIP 46 275
No external refs found!