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  5. LOC_Os04g47320.1

LOC_Os04g47320.1 (MSL5, LOC_Os04g47320)


Aliases : MSL5, LOC_Os04g47320

Description : mechanosensitive ion channel (MSL)


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g47320.1

Target Alias Description ECC score Gene Family Method Actions
AT2G17000 No alias Mechanosensitive ion channel family protein 0.03 OrthoFinder output from all 47 species
Cba_g03379 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29706 MSL10, ATMSL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023959001 MSL4 Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
Ore_g44085 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25861 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46634 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007089 MSL4 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Solyc10g055710.2.1 MSL6, Solyc10g055710 mechanosensitive ion channel (MSL) 0.04 OrthoFinder output from all 47 species
Zm00001e007259_P002 Zm00001e007259 mechanosensitive ion channel (MSL) 0.1 OrthoFinder output from all 47 species
Zm00001e036222_P001 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.04 OrthoFinder output from all 47 species
Zm00001e041490_P001 Zm00001e041490 mechanosensitive ion channel (MSL) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 701 906
No external refs found!