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  5. LOC_Os04g47860.2

LOC_Os04g47860.2 (AtIDD12, IDD12, LOC_Os04g47860)


Aliases : AtIDD12, IDD12, LOC_Os04g47860

Description : C2H2 zinc finger transcription factor


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g47860.2
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT5G44160 NUC C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
Adi_g079392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48833 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g13557 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g22280 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34150.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G056300.1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010961001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os03g10140.1 LOC_Os03g10140 C2H2 zinc finger transcription factor. elicitor peptide... 0.03 OrthoFinder output from all 47 species
Ore_g33896 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g31312 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc06g072360.3.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc08g063040.4.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g56903 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007235_P002 IDD5, AtIDD5,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e010319_P001 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 97 119
No external refs found!